Added MDS Import files

Signed-off-by: Bernardo Carvalho <bernardo.carvalho@tecnico.ulisboa.pt>

.gitignore

@@ -30,3 +30,7 @@
 *.exe
 *.out
 *.app
+
+# MDSplus
+*.datafile
+*.tree

Configurations/RTApp-Isttok-Mds.cfg

@@ -0,0 +1,854 @@
++EPICSCAInterface= {
+    Class = EPICS::EPICSCAClient
+    StackSize = 1048576
+    CPUs = 0x1
+    AutoStart = 0
+    +PV_STATUS = {
+        Class = EPICS::EPICSPV
+        PVName = "MARTE2-DEMO-APP:STATUS"
+        PVType = int32
+    }    
+    +PV_COMMAND = {
+        Class = EPICS::EPICSPV
+        PVName = "MARTE2-DEMO-APP:COMMAND"
+        PVType = uint32
+        Event = {
+            Destination = StateMachine
+            PVValue = Function
+            FunctionMap = {{"2", "GOTOPULSING"}, {"1", "GOTOWAITING_FOR_PRE"}, {"0", "GOTOIDLE"}}
+        }
+    }
+}
++WebRoot = {
+    Class = HttpObjectBrowser
+    Root = "."
+    +ObjectBrowse = {
+        Class = HttpObjectBrowser
+        Root = "/"
+    }
+    +ResourcesHtml = {
+        Class = HttpDirectoryResource
+        BaseDir = "../../MARTe2/MARTe2/Resources/HTTP/"
+    }    
+    +HttpMessageInterface = {
+        Class = HttpMessageInterface
+        +GOTOIDLE = {
+            Class = Message
+            Destination = StateMachine
+            Function = GOTOIDLE
+            Mode = ExpectsReply
+        }
+        +GOTOWAITING_FOR_PRE = {
+            Class = Message
+            Destination = StateMachine
+            Function = GOTOWAITING_FOR_PRE
+            Mode = ExpectsReply
+        }
+        +GOTOPULSING = {
+            Class = Message
+            Destination = StateMachine
+            Function = GOTOPULSING
+            Mode = ExpectsReply
+        }
+        +GOTOERR = {
+            Class = Message
+            Destination = StateMachineError
+            Function = GOTOERR 
+            Mode = ExpectsReply
+        }
+    }
+}
++WebServer = {
+    Class = HttpService
+    Port = 8084
+    WebRoot = WebRoot
+    Timeout = 0
+    ListenMaxConnections = 255
+    AcceptTimeout = 1000
+    MaxNumberOfThreads = 8
+    MinNumberOfThreads = 1
+}
++StateMachine = {
+    Class = StateMachine
+    +INITIAL = {
+        Class = ReferenceContainer      
+        +START = {
+            Class = StateMachineEvent
+            NextState = "IDLE"
+            NextStateError = "IDLE"
+            Timeout = 0
+            +StartHttpServer = {
+                Class = Message
+                Destination = "WebServer"
+                Function = "Start"
+                Mode = ExpectsReply
+            }
+            +StartEPICSCAInterface = {
+                Class = Message
+                Destination = "EPICSCAInterface"
+                Mode = ExpectsReply
+                Function = "Start"
+            }
+            +OpenTreeMsg = {
+                Class = Message
+                Destination = "MdsLoopApp.Data.MDSWriter"
+                Function = OpenTree
+                Mode = ExpectsReply
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = 1
+                }
+            }
+            +ChangeToStateIdleMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Mode = ExpectsReply
+                Function = PrepareNextState
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = Idle
+                }
+            }
+            +StartNextStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StartNextStateExecution
+                Mode = ExpectsReply
+            }
+        }
+    }
+    +IDLE = {
+        Class = ReferenceContainer
+        +GOTOWAITING_FOR_PRE = {
+            Class = StateMachineEvent
+            NextState = "WAITING_FOR_PRE"
+            NextStateError = "IDLE"
+            Timeout = 0 
+            +ChangeToRunMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Mode = ExpectsReply
+                Function = PrepareNextState
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = Run
+                }
+            }
+            +StopCurrentStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StopCurrentStateExecution
+                Mode = ExpectsReply
+            }
+            +StartNextStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StartNextStateExecution
+                Mode = ExpectsReply
+            }
+        }
+    }
+    +WAITING_FOR_PRE = {
+        Class = ReferenceContainer
+        +ENTER = {
+            Class = ReferenceContainer
+            +SetStatusPV = {
+                Class = Message
+                Destination = "EPICSCAInterface.PV_STATUS"
+                Function = CAPut
+                Mode = ExpectsReply
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = 1
+                }
+            }
+        }
+        +GOTOPULSING = {
+            Class = StateMachineEvent
+            NextState = "PULSING"
+            NextStateError = "IDLE"
+            Timeout = 0 
+            +StopCurrentStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StopCurrentStateExecution
+                Mode = ExpectsReply
+            }
+            +StartNextStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StartNextStateExecution
+                Mode = ExpectsReply
+            }
+        }
+    }
+    +PULSING = {
+        Class = ReferenceContainer
+        +ENTER = {
+            Class = ReferenceContainer
+            +SetStatusPV = {
+                Class = Message
+                Destination = "EPICSCAInterface.PV_STATUS"
+                Function = CAPut
+                Mode = ExpectsReply
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = 2
+                }
+            }
+        }
+        +GOTOIDLE = {
+            Class = StateMachineEvent
+            NextState = "IDLE"
+            NextStateError = "IDLE"
+            Timeout = 0         
+            +ChangeToIdleMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Mode = ExpectsReply
+                Function = PrepareNextState
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = Idle
+                }
+            }
+            +StopCurrentStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StopCurrentStateExecution
+                Mode = ExpectsReply
+            }
+            +StartNextStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StartNextStateExecution
+                Mode = ExpectsReply
+            }
+            +SetStatusPV = {
+                Class = Message
+                Destination = "EPICSCAInterface.PV_STATUS"
+                Function = CAPut
+                Mode = ExpectsReply
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = 0
+                }
+            }
+        }   
+    }
+}
+$MdsLoopApp = {
+    Class = RealTimeApplication
+    +Functions = {
+        Class = ReferenceContainer
+        +GAMTimer = {
+            Class = IOGAM
+            InputSignals = {
+                Counter = {
+                    DataSource = Timer
+                    Type = uint32
+                }
+                Time = {
+                    Frequency = 10000
+                    DataSource = Timer
+                    Type = uint32
+                }
+                Idle_Thread1_CycleTime = {                  
+                    DataSource = Timings
+                    Alias = "Idle.Thread1_CycleTime"
+                    Type = uint32           
+                }
+                Run_Thread1_CycleTime = {                   
+                    DataSource = Timings
+                    Alias = "Run.Thread1_CycleTime"
+                    Type = uint32           
+                }
+            }
+            OutputSignals = {
+                Counter = {
+                    DataSource = DDB1
+                    Type = uint32
+                }
+                Time = {
+                    DataSource = DDB1
+                    Type = uint32
+                }
+                Idle_Thread1_CycleTime = {
+                    DataSource = DDB1
+                    Type = uint32           
+                }
+                Run_Thread1_CycleTime = {                   
+                    DataSource = DDB1
+                    Type = uint32           
+                }
+            }
+        }
+        +GAMWF1 = {
+            Class = WaveformGAM::WaveformSin
+            Amplitude = 10.0
+            Frequency = 1.0
+            Phase = 0.0
+            Offset = 1.1
+            InputSignals = {
+                Time = {
+                    DataSource = "DDB1"
+                    Type = uint32 //Supported type uint32 (int32 also valid since time cannot be negative. uint64 && int64 valid types)
+                }
+            }
+            OutputSignals = {
+                Wave = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+            }
+        }
+        +GAMConvert2Double = {
+            Class = "ConversionGAM"
+            InputSignals = {
+                Mirnov0 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov1 = {
+                    DataSource = DDB1
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov2 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov3 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov4 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov5 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov6 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov7 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov8 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov9 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov10= {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov11 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+            }
+            OutputSignals = {
+                MirnovD0 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD1 = {
+                    DataSource = DDB1
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD2 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD3 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD4 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD5 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD6 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD7 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD8 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD9 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD10= {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                MirnovD11 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+            }
+        }
+        +GAMSSM = {
+            Class = SSMGAM
+            StateMatrix = {{1.0 0}{0 1.0}} //Compulsory
+            InputMatrix = {{0 0 0 0}{0 0 0 0}} //Compulsory
+            OutputMatrix = {{0 0}} //Compulsory
+            FeedthroughMatrix = {{1 1 1 1}} //Optional
+            ResetInEachState = 1//Compulsory. 1–> reset in each state, 0–> reset if the previous state is different from the next state
+            SampleFrequency = 0.0001 // Currently optional and not used.
+            InputSignals = {
+                MirnovD0 = { //input of the SS
+                    DataSource = "DDB1"
+                    Type = float64 //Only supported type.
+                    NumberOfElements = 1
+                    NumberOfDimensions = 1 // or 0
+                    Samples = 1
+                }
+                MirnovD1 = {
+                    DataSource = "DDB1"
+                    Type = float64 //Only supported type.
+                    NumberOfElements = 1
+                    NumberOfDimensions = 1
+                    Samples = 1
+                }
+                MirnovD2 = {
+                    DataSource = "DDB1"
+                    Type = float64 //Only supported type.
+                    NumberOfElements = 1
+                    NumberOfDimensions = 1
+                    Samples = 1
+                }
+                MirnovD3 = {
+                    DataSource = "DDB1"
+                    Type = float64 //Only supported type.
+                    NumberOfElements = 1
+                    NumberOfDimensions = 1
+                    Samples = 1
+                }
+            }
+            OutputSignals = {
+                OutputSignal1 = {
+                    DataSource = "DDB1"
+                    Type = float64
+                }
+                State0 = {
+                    Type = float64
+                    DataSource = "DDB1"
+                }
+                State1 = {
+                    Type = float64
+                    DataSource = "DDB1"
+                }
+            }
+        }            
+        +GAMMDSReader = {
+            Class = IOGAM
+            InputSignals = {
+                MirnovMdsR0 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR1 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR2 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR3 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR4 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR5 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR6 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR7 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR8 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR9 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR10 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR11 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                LangmuirMdsR0 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                LangmuirMdsR1 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                LangmuirMdsR2 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                LangmuirMdsR3 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                Time = {
+                    DataSource = MDSReader
+                    Type = uint32
+                }
+            }
+            OutputSignals = {
+                Mirnov0 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov1 = {
+                    DataSource = DDB1
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov2 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov3 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov4 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov5 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov6 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov7 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov8 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov9 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov10= {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov11 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Langmuir0 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Langmuir1 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Langmuir2 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Langmuir3 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                MdsTime = {
+                    DataSource = "DDB1"
+                    Type = uint32
+                }
+            }
+        }
+        +GAMMDSWriter = {
+            Class = IOGAM
+            InputSignals = {
+                Mirnov0 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                OutputSignal1 = {
+                        DataSource = "DDB1"
+                        Type = float64
+                }
+                CycleTime = {
+                    DataSource = Timings
+                    Alias = Idle.Thread1_CycleTime
+                    Type = uint32
+                }
+            }
+            OutputSignals = {
+                OutMdsW0 = {
+                    DataSource = MDSWriter
+                    Type = float32
+                }
+                OutMdsW1 = {
+                    DataSource = MDSWriter
+                    Type = float64
+                }
+                CycleTime = {
+                    DataSource = MDSWriter
+                    Type = uint32
+                }
+            }
+        }
+    }
+    +Data = {
+        Class = ReferenceContainer
+        DefaultDataSource = DDB1
+        +DDB1 = {
+            Class = GAMDataSource
+        }        
+        +LoggerDataSource = {
+            Class = LoggerDataSource
+        }
+        +Timings = {
+            Class = TimingDataSource
+        }
+        +Timer = {
+            Class = LinuxTimer
+            SleepNature = "Default"
+            ExecutionMode = RealTimeThread
+            Signals = {
+                Counter = {
+                    Type = uint32
+                }
+                Time = {
+                    Type = uint32
+                }
+            }
+        }
+        +MDSReader = {
+            Class = MDSReader
+            TreeName = "isttoksdas" //Compulsory. Name of the MDSplus tree.
+            //TreeName = "rtappwriter" //Compulsory. Name of the MDSplus tree.
+            ShotNumber = 46241//Compulsory. 0 –> last shot number (to use 0 shotid.sys must exist)
+            Frequency = 10000 // in Hz. Is the cycle time of the real time application.
+            Signals = {
+                MirnovMdsR0 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_0.RAW" // node of the tree node
+//                    \TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_0.RAW
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR1 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_1.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR2 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_2.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR3 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_3.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR4 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_4.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR5 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_5.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR6 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_6.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR7 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_7.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR8 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_8.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR9 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_9.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR10 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_10.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR11 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_0.CHANNEL_11.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                LangmuirMdsR0 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_1.CHANNEL_0.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                LangmuirMdsR1 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_1.CHANNEL_1.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                LangmuirMdsR2 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_1.CHANNEL_2.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                LangmuirMdsR3 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC_1.CHANNEL_3.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                Time = { //Compulsory
+                    Type = "uint32" //can be any of the supported types
+                    NumberOfElements = 1 //must be always one.
+                }
+            }
+        }
+        +MDSWriter = {
+            Class = MDSWriter
+            NumberOfBuffers = 10 //Compulsory. Number of buffers in the circular buffer defined above. Each buffer is capable of holding a copy of all the DataSourceI signals.
+            CPUMask = 2 //Compulsory. Affinity assigned to the threads responsible for asynchronously flush data into the MDSplus database.
+            StackSize = 10000000 //Compulsory. Stack size of the thread above.
+            TreeName = "isttokoutput" //Compulsory. Name of the MDSplus tree.
+            PulseNumber = 1 //Optional. If -1 a new pulse will be created and the MDSplus pulse number incremented.
+            StoreOnTrigger = 0 //Compulsory. If 0 all the data in the circular buffer is continuously stored. If 1 data is stored when the Trigger signal is 1 (see below).
+            EventName = "updatejScope" //Compulsory. Event sent to jScope when TimeRefresh seconds have elapsed.
+            TimeRefresh = 5 //Compulsory. An event with the name set in the property EventName is sent to jScope when TimeRefresh seconds have elapsed.
+            Signals = {
+                OutMdsW0 = { //As many as required.
+                    NodeName = "\TOP.OUT.OUT0" // node of the tree node
+                    Period = 0.0001 //Compulsory. Period between signal samples.
+                    AutomaticSegmentation = 0
+                    MakeSegmentAfterNWrites = 100
+                }
+                OutMdsW1 = { //As many as required.
+                    NodeName = "\TOP.OUT.OUT1" // node of the tree node
+                    Period = 0.0001 //Compulsory. Period between signal samples.
+                    AutomaticSegmentation = 0
+                    MakeSegmentAfterNWrites = 100
+                }
+                CycleTime = { //As many as required.
+                    NodeName = "\TOP.OUT.Cycle_Time" // node of the tree node
+                    //NodeName = "Cycle_Time" //Compulsory. MDSplus node name
+                    Period = 0.0001 //Compulsory. Period between signal samples.
+                    AutomaticSegmentation = 0
+                    MakeSegmentAfterNWrites = 100
+                }
+            }
+        }
+    }
+    +States = {
+        Class = ReferenceContainer
+        +Idle = {
+            Class = RealTimeState
+            +Threads = {
+                Class = ReferenceContainer
+                +Thread1 = {
+                    Class = RealTimeThread
+                    CPUs = 0x1
+                    Functions = {GAMTimer GAMWF1}
+                }
+            }
+        }
+        +Run = {
+            Class = RealTimeState
+            +Threads = {
+                Class = ReferenceContainer
+                +Thread1 = {
+                    Class = RealTimeThread
+                    CPUs = 0x1
+                    Functions = {GAMTimer GAMWF1 GAMMDSReader GAMConvert2Double GAMSSM GAMMDSWriter}
+                }
+            }
+        }
+    }
+    +Scheduler = {
+        Class = GAMScheduler
+        TimingDataSource = Timings
+    }
+}
+//  vim: syntax=cpp ts=4 sw=4 sts=4 sr et

Configurations/RTApp-Sdas-to-MDSplus.cfg

@@ -0,0 +1,444 @@
++EPICSCAInterface= {
+    Class = EPICS::EPICSCAClient
+    StackSize = 1048576
+    CPUs = 0x1
+    AutoStart = 0
+    +PV_STATUS = {
+        Class = EPICS::EPICSPV
+        PVName = "MARTE2-DEMO-APP:STATUS"
+        PVType = int32
+    }    
+    +PV_COMMAND = {
+        Class = EPICS::EPICSPV
+        PVName = "MARTE2-DEMO-APP:COMMAND"
+        PVType = uint32
+        Event = {
+            Destination = StateMachine
+            PVValue = Function
+            FunctionMap = {{"1", "GOTORUN"}, {"0", "GOTOIDLE"}}
+        }
+    }
+}
++WebRoot = {
+    Class = HttpObjectBrowser
+    Root = "."
+    +ObjectBrowse = {
+        Class = HttpObjectBrowser
+        Root = "/"
+    }
+    +ResourcesHtml = {
+        Class = HttpDirectoryResource
+        BaseDir = "../../MARTe2/MARTe2/Resources/HTTP/"
+    }    
+    +HttpMessageInterface = {
+        Class = HttpMessageInterface
+        +GOTOIDLE = {
+            Class = Message
+            Destination = StateMachine
+            Function = GOTOIDLE
+            Mode = ExpectsReply
+        }
+        +GOTORUN = {
+            Class = Message
+            Destination = StateMachine
+            Function = GOTORUN
+            Mode = ExpectsReply
+        }
+        +GOTOERR = {
+            Class = Message
+            Destination = StateMachineError
+            Function = GOTOERR 
+            Mode = ExpectsReply
+        }
+    }
+}
++WebServer = {
+    Class = HttpService
+    Port = 8084
+    WebRoot = WebRoot
+    Timeout = 0
+    ListenMaxConnections = 255
+    AcceptTimeout = 1000
+    MaxNumberOfThreads = 8
+    MinNumberOfThreads = 1
+}
++StateMachine = {
+    Class = StateMachine
+    +INITIAL = {
+        Class = ReferenceContainer      
+        +START = {
+            Class = StateMachineEvent
+            NextState = "IDLE"
+            NextStateError = "IDLE"
+            Timeout = 0
+            +StartHttpServer = {
+                Class = Message
+                Destination = "WebServer"
+                Function = "Start"
+                Mode = ExpectsReply
+            }
+            +StartEPICSCAInterface = {
+                Class = Message
+                Destination = "EPICSCAInterface"
+                Mode = ExpectsReply
+                Function = "Start"
+            }
+            +OpenTreeMsg = {
+                Class = Message
+                Destination = "MdsLoopApp.Data.MDSWriter"
+                Function = OpenTree
+                Mode = ExpectsReply
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = 1
+                }
+            }
+            +ChangeToStateIdleMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Mode = ExpectsReply
+                Function = PrepareNextState
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = Idle
+                }
+            }
+            +StartNextStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StartNextStateExecution
+                Mode = ExpectsReply
+            }
+        }
+    }
+    +IDLE = {
+        Class = ReferenceContainer
+        +GOTORUN = {
+            Class = StateMachineEvent
+            NextState = "RUN"
+            NextStateError = "IDLE"
+            Timeout = 0 
+            +ChangeToRunMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Mode = ExpectsReply
+                Function = PrepareNextState
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = Run
+                }
+            }
+            +StopCurrentStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StopCurrentStateExecution
+                Mode = ExpectsReply
+            }
+            +StartNextStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StartNextStateExecution
+                Mode = ExpectsReply
+            }
+        }
+    }
+    +RUN = {
+        Class = ReferenceContainer
+        +ENTER = {
+            Class = ReferenceContainer
+            +SetStatusPV = {
+                Class = Message
+                Destination = "EPICSCAInterface.PV_STATUS"
+                Function = CAPut
+                Mode = ExpectsReply
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = 1
+                }
+            }
+        }
+        +GOTOIDLE = {
+            Class = StateMachineEvent
+            NextState = "IDLE"
+            NextStateError = "IDLE"
+            Timeout = 0         
+            +ChangeToIdleMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Mode = ExpectsReply
+                Function = PrepareNextState
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = Idle
+                }
+            }
+            +StopCurrentStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StopCurrentStateExecution
+                Mode = ExpectsReply
+            }
+            +StartNextStateExecutionMsg = {
+                Class = Message
+                Destination = MdsLoopApp
+                Function = StartNextStateExecution
+                Mode = ExpectsReply
+            }
+            +SetStatusPV = {
+                Class = Message
+                Destination = "EPICSCAInterface.PV_STATUS"
+                Function = CAPut
+                Mode = ExpectsReply
+                +Parameters = {
+                    Class = ConfigurationDatabase
+                    param1 = 0
+                }
+            }
+        }   
+    }
+}
+$MdsLoopApp = {
+    Class = RealTimeApplication
+    +Functions = {
+        Class = ReferenceContainer
+        +GAMTimer = {
+            Class = IOGAM
+            InputSignals = {
+                Counter = {
+                    DataSource = Timer
+                    Type = uint32
+                }
+                Time = {
+                    Frequency = 10000
+                    DataSource = Timer
+                    Type = uint32
+                }
+                Idle_Thread1_CycleTime = {                  
+                    DataSource = Timings
+                    Alias = "Idle.Thread1_CycleTime"
+                    Type = uint32           
+                }
+                Run_Thread1_CycleTime = {                   
+                    DataSource = Timings
+                    Alias = "Run.Thread1_CycleTime"
+                    Type = uint32           
+                }
+            }
+            OutputSignals = {
+                Counter = {
+                    DataSource = DDB1
+                    Type = uint32
+                }
+                Time = {
+                    DataSource = DDB1
+                    Type = uint32
+                }
+                Idle_Thread1_CycleTime = {
+                    DataSource = DDB1
+                    Type = uint32           
+                }
+                Run_Thread1_CycleTime = {                   
+                    DataSource = DDB1
+                    Type = uint32           
+                }
+            }
+        }
+        +GAMWF1 = {
+            Class = WaveformGAM::WaveformSin
+            Amplitude = 10.0
+            Frequency = 1.0
+            Phase = 0.0
+            Offset = 1.1
+            InputSignals = {
+                Time = {
+                    DataSource = "DDB1"
+                    Type = uint32 //Supported type uint32 (int32 also valid since time cannot be negative. uint64 && int64 valid types)
+                }
+            }
+            OutputSignals = {
+                Wave = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+            }
+        }
+        +GAMMDSReader = {
+            Class = IOGAM
+            InputSignals = {
+                MirnovMdsR0 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                MirnovMdsR1 = {
+                    DataSource = MDSReader
+                    Type = float32
+                }
+                Time = {
+                    DataSource = MDSReader
+                    Type = uint32
+                }
+            }
+            OutputSignals = {
+                Mirnov0 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov1 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                MdsTime = {
+                    DataSource = "DDB1"
+                    Type = uint32
+                }
+            }
+        }
+        +GAMMDSWriter = {
+            Class = IOGAM
+            InputSignals = {
+                Mirnov0 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                Mirnov1 = {
+                    DataSource = "DDB1"
+                    Type = float32
+                }
+                CycleTime = {
+                    DataSource = Timings
+                    Alias = Idle.Thread1_CycleTime
+                    Type = uint32
+                }
+            }
+            OutputSignals = {
+                OutMdsW0 = {
+                    DataSource = MDSWriter
+                    Type = float32
+                }
+                OutMdsW1 = {
+                    DataSource = MDSWriter
+                    Type = float32
+                }
+                CycleTime = {
+                    DataSource = MDSWriter
+                    Type = uint32
+                }
+            }
+        }
+    }
+    +Data = {
+        Class = ReferenceContainer
+        DefaultDataSource = DDB1
+        +DDB1 = {
+            Class = GAMDataSource
+        }        
+        +LoggerDataSource = {
+            Class = LoggerDataSource
+        }
+        +Timings = {
+            Class = TimingDataSource
+        }
+        +Timer = {
+            Class = LinuxTimer
+            SleepNature = "Default"
+            ExecutionMode = RealTimeThread
+            Signals = {
+                Counter = {
+                    Type = uint32
+                }
+                Time = {
+                    Type = uint32
+                }
+            }
+        }
+        +MDSReader = {
+            Class = MDSReader
+            TreeName = "isttoksdas" //Compulsory. Name of the MDSplus tree.
+            //TreeName = "rtappwriter" //Compulsory. Name of the MDSplus tree.
+            ShotNumber = 46241//Compulsory. 0 –> last shot number (to use 0 shotid.sys must exist)
+            Frequency = 10000 // in Hz. Is the cycle time of the real time application.
+            Signals = {
+                MirnovMdsR0 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC1.CHANNELS.INPUT_00.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                MirnovMdsR1 = {
+                    NodeName = "\TOP.HARDWARE.ATCA1.IOC1.CHANNELS.INPUT_01.RAW" // node of the tree node
+                    Type = "float32" // Can be any of the node supported types
+                    NumberOfElements = 1
+                    DataManagement = 0 //could be 0, 1 or 2
+                    HoleManagement = 1 //could be 0 or 1
+                }
+                Time = { //Compulsory
+                    Type = "uint32" //can be any of the supported types
+                    NumberOfElements = 1 //must be always one.
+                }
+            }
+        }
+        +MDSWriter = {
+            Class = MDSWriter
+            NumberOfBuffers = 10 //Compulsory. Number of buffers in the circular buffer defined above. Each buffer is capable of holding a copy of all the DataSourceI signals.
+            CPUMask = 2 //Compulsory. Affinity assigned to the threads responsible for asynchronously flush data into the MDSplus database.
+            StackSize = 10000000 //Compulsory. Stack size of the thread above.
+            TreeName = "isttokoutput" //Compulsory. Name of the MDSplus tree.
+            PulseNumber = 1 //Optional. If -1 a new pulse will be created and the MDSplus pulse number incremented.
+            StoreOnTrigger = 0 //Compulsory. If 0 all the data in the circular buffer is continuously stored. If 1 data is stored when the Trigger signal is 1 (see below).
+            EventName = "updatejScope" //Compulsory. Event sent to jScope when TimeRefresh seconds have elapsed.
+            TimeRefresh = 5 //Compulsory. An event with the name set in the property EventName is sent to jScope when TimeRefresh seconds have elapsed.
+            Signals = {
+                OutMdsW0 = { //As many as required.
+                    NodeName = "\TOP.OUT.OUT0" // node of the tree node
+                    Period = 0.0001 //Compulsory. Period between signal samples.
+                    AutomaticSegmentation = 0
+                    MakeSegmentAfterNWrites = 100
+                }
+                OutMdsW1 = { //As many as required.
+                    NodeName = "\TOP.OUT.OUT1" // node of the tree node
+                    Period = 0.0001 //Compulsory. Period between signal samples.
+                    AutomaticSegmentation = 0
+                    MakeSegmentAfterNWrites = 100
+                }
+                CycleTime = { //As many as required.
+                    NodeName = "\TOP.OUT.Cycle_Time" // node of the tree node
+                    //NodeName = "Cycle_Time" //Compulsory. MDSplus node name
+                    Period = 0.0001 //Compulsory. Period between signal samples.
+                    AutomaticSegmentation = 0
+                    MakeSegmentAfterNWrites = 100
+                }
+            }
+        }
+    }
+    +States = {
+        Class = ReferenceContainer
+        +Idle = {
+            Class = RealTimeState
+            +Threads = {
+                Class = ReferenceContainer
+                +Thread1 = {
+                    Class = RealTimeThread
+                    CPUs = 0x1
+                    Functions = {GAMTimer GAMWF1 }
+                }
+            }
+        }
+        +Run = {
+            Class = RealTimeState
+            +Threads = {
+                Class = ReferenceContainer
+                +Thread1 = {
+                    Class = RealTimeThread
+                    CPUs = 0x1
+                    Functions = {GAMTimer GAMWF1 GAMMDSReader GAMMDSWriter}
+                }
+            }
+        }
+    }
+    +Scheduler = {
+        Class = GAMScheduler
+        TimingDataSource = Timings
+    }
+}
+//  vim: syntax=cpp ts=4 sw=4 sts=4 sr et

Trees/CreateIsttokSdas.tcl

@@ -26,6 +26,11 @@ put CLOCK_FREQ "20000"
 add node .CHANNELS
 set def .CHANNELS
 add node .INPUT_00
+
+add node .INPUT_12
+add node .INPUT_13
+add node .INPUT_14
+add node .INPUT_15
 set def  .INPUT_00
 add node RAW/usage=signal
 add node GAIN/usage=numeric
@@ -157,6 +162,10 @@ put OFFSET "0.0"
 add node SIGNAL/usage=signal
 put SIGNAL "BUILD_SIGNAL(GAIN*(RAW - OFFSET),RAW)"
 
+set def \ISTTOKSDAS::TOP.HARDWARE.ATCA1.IOC1.CHANNELS
+set def \ISTTOKSDAS::TOP.HARDWARE.ATCA1.IOC1.CHANNELS.INPUT_12
+add node IOCINTCHAN/usage=subtree
+
 
 set def \ISTTOKSDAS::TOP.INP
 add node MEAS0/usage=signal

Trees/CreateRTAppMDSPlusTree.tcl

@@ -0,0 +1,76 @@
+edit rtappdemo/new
+
+add node .INP
+add node .REFS
+add node .ERRORS
+add node .CONTROLS
+add node .STATES
+add node .PERF
+add node TIME/usage=signal
+add node TIMED/usage=signal
+
+set def \RTAPPDEMO::TOP.INP
+add node MEAS0/usage=signal
+add node MEAS0D/usage=signal
+add node MEAS0F/usage=signal
+add node MEAS0FD/usage=signal
+add node MEAS1/usage=signal
+add node MEAS1D/usage=signal
+add node MEAS1F/usage=signal
+add node MEAS1FD/usage=signal
+add node MEAS2/usage=signal
+add node MEAS2D/usage=signal
+add node MEAS2F/usage=signal
+add node MEAS2FD/usage=signal
+add node MEAS3/usage=signal
+add node MEAS3D/usage=signal
+add node MEAS3F/usage=signal
+add node MEAS3FD/usage=signal
+
+set def \RTAPPDEMO::TOP.REFS
+add node REF0/usage=signal
+add node REF0D/usage=signal
+add node REF1/usage=signal
+add node REF1D/usage=signal
+add node REF2/usage=signal
+add node REF2D/usage=signal
+add node REF3/usage=signal
+add node REF3D/usage=signal
+
+set def \RTAPPDEMO::TOP.ERRORS
+add node ERROR0/usage=signal
+add node ERROR0D/usage=signal
+add node ERROR1/usage=signal
+add node ERROR1D/usage=signal
+add node ERROR2/usage=signal
+add node ERROR2D/usage=signal
+add node ERROR3/usage=signal
+add node ERROR3D/usage=signal
+
+set def \RTAPPDEMO::TOP.CONTROLS
+add node CONTROL0/usage=signal
+add node CONTROL0D/usage=signal
+add node CONTROL1/usage=signal
+add node CONTROL1D/usage=signal
+add node CONTROL2/usage=signal
+add node CONTROL2D/usage=signal
+add node CONTROL3/usage=signal
+add node CONTROL3D/usage=signal
+
+set def \RTAPPDEMO::TOP.STATES
+add node STATE0/usage=signal
+add node STATE0D/usage=signal
+add node STATE1/usage=signal
+add node STATE1D/usage=signal
+add node STATE2/usage=signal
+add node STATE2D/usage=signal
+add node STATE3/usage=signal
+add node STATE3D/usage=signal
+
+set def \RTAPPDEMO::TOP.PERF
+add node CYCLET/usage=signal
+add node CYCLETD/usage=signal
+
+write
+close
+exit

marte2-exports.sh

@@ -0,0 +1,31 @@
+# MARTe2 local envs for running/compiling MARTe2 Rt Apps
+export TARGET=x86-linux
+export MARTe2_HOME=~/git-repos/MARTe2
+
+export MARTe2_DIR=$MARTe2_HOME/MARTe2
+export MARTe2_Components_DIR=$MARTe2_HOME/MARTe2-components
+export MARTe2_Demos_DIR=~/git-repos/MARTe2-demos-padova
+
+export EPICS_BASE=/opt/epics/epics-base
+export EPICSPVA=/opt/epics/epics-base
+export EPICS_HOST_ARCH=linux-x86_64
+
+#export EPICS_CA_ADDR_LIST="localhost 192.168.1.110 efda-marte.ipfn.tecnico.ulisboa.pt"
+export EPICS_CA_ADDR_LIST="localhost"
+export EPICS_CA_AUTO_ADDR_LIST="NO"
+
+export MDSPLUS_DIR=/usr/local/mdsplus
+# export default_tree_path=$MARTe2_HOME/mdsplus-trees
+export default_tree_path=$MARTe2_HOME/mdsplus-trees
+export rtappdemo_path=~/git-repos/MARTe2-isttok/Trees
+export rtappwriter_path=~/git-repos/MARTe2-isttok/Trees
+export isttoksdas_path=~/git-repos/MARTe2-isttok/Trees
+export isttokoutput_path=~/git-repos/MARTe2-isttok/Trees
+# export rtappisttok_path=$MARTe2_HOME/mdsplus-trees
+
+export PATH=$MDSPLUS_DIR/bin:$EPICS_BASE/bin/$EPICS_HOST_ARCH:$PATH
+#export SDN_CORE_INCLUDE_DIR=~/Projects/SDN_1.0.12_nonCCS/src/main/c++/include/
+#export SDN_CORE_LIBRARY_DIR=~/Projects/SDN_1.0.12_nonCCS/target/lib/
+export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_DIR/Build/x86-linux/Core/:$EPICS_BASE/lib/$EPICS_HOST_ARCH
+#:$SDN_CORE_LIBRARY_DIR
+source /usr/local/mdsplus/setup.sh