diff --git a/Analysis/ClientMdsThin.py b/Analysis/ClientMdsThin.py
index a2c9cc0..87b9ad8 100644
--- a/Analysis/ClientMdsThin.py
+++ b/Analysis/ClientMdsThin.py
@@ -3,7 +3,7 @@
This script get data from the MARTe2 ATCAIop stored in MDSplus
"""
import numpy as np
-from mdsClient import mdsClient
+import mdsthin
from mdsthin.exceptions import TreeNNF, TreeFOPENR
import argparse
@@ -13,6 +13,7 @@ ADC_DECIM_RATE = 200 # FPGA decimation
MDSTREENAME = 'isttokmarte'
MDSPLUS_HOST = "192.168.1.173"
+MDS_URL = "oper@atca-marte2"
# ADC_CHANNELS = 12 # channels stored in ISTTOK MDS
ADC_RAW = '\\TOP.HARDWARE.ATCA_2.IOP_9.CHANNEL_{}.ADC_DECIM'
ADC_RAW_D = '\\TOP.HARDWARE.ATCA_2.IOP_9.CHANNEL_{}.ADC_DECIM_D'
@@ -28,13 +29,14 @@ class ClientMdsThin():
Models an MDS Thin Client connection to ISTTOK ATCA2 server
"""
- def __init__(self, shot=52737, num_channels=12):
+ def __init__(self, url=MDS_URL, num_channels=12):
"""
Initializes the connection to the High-Precision-AD-HAT
"""
try:
- self.client = mdsClient(MDSPLUS_HOST, user='oper')
- self.client.openTree(MDSTREENAME, shot)
+ # self.client = mdsClient(MDSPLUS_HOST, user='oper')
+ self.client = mdsthin.Connection('ssh://' + url)
+ #self.client.openTree(MDSTREENAME, shot)
except TreeFOPENR:
print(f"Tree {MDSTREENAME} / Shot {shot} Not found")
raise ValueError
@@ -42,13 +44,24 @@ class ClientMdsThin():
self.adcRawData = []
self.adcIntegData = []
- def getData(self):
+ def getTreeData(self, shot=5240):
+ try:
+ self.client.openTree(MDSTREENAME, shot)
+ except TreeFOPENR:
+ print(f"Tree {MDSTREENAME} / Shot {shot} Not found")
+ raise ValueError
self.adcRawData = []
self.adcIntegData = []
+ node0 = ADC_RAW.format(0)
+ dim = "dim_of({})".format(node0)
+ self.timeR = self.client.get(dim).data()
+ node0 = ADC_INTEG.format(0)
+ dim = "dim_of({})".format(node0)
+ self.timeI = self.client.get(dim).data()
for i in range(ADC_CHANNELS):
- data = self.client.getData(ADC_RAW.format(i))
+ data = self.client.get(ADC_RAW.format(i)).data()
self.adcRawData.append(data[:, 0])
- data = self.client.getData(ADC_INTEG.format(i))
+ data = self.client.get(ADC_INTEG.format(i)).data()
self.adcIntegData.append(data[:, 0])
def calcEoWo(self):
@@ -78,13 +91,16 @@ if __name__ == '__main__':
type=int, default=[1, 12])
parser.add_argument('-s', '--shot',
type=int, help='Mds+ pulse Number ([1, ...])',
- default=52737)
+ default=52740)
# parser.add_argument('-e', '--averages', action='store_true', help='Calc averages')
# parser.add_argument('-w', '--drift', action='store_true', help='Calc drifts')
+ parser.add_argument('-u', '--url', default=MDS_URL,
+ help='MDSplus host url')
+
args = parser.parse_args()
- clt = ClientMdsThin(shot=args.shot, num_channels=12)
- #clt.getData()
+ clt = ClientMdsThin(url=args.url, shot=args.shot, num_channels=12)
+ clt.getTreeData()
# main(args)
diff --git a/Analysis/pqtgPlotMds.py b/Analysis/pqtgPlotMds.py
new file mode 100644
index 0000000..793c957
--- /dev/null
+++ b/Analysis/pqtgPlotMds.py
@@ -0,0 +1,124 @@
+#!/usr/bin/env python3
+"""
+This script plots the MARTe2 ATCAIop samples stored in MDSplus
+All of the plots may be panned/scaled by dragging with
+the left/right mouse buttons. Right click on any plot to show a context menu.
+
+To change EPICS EO, WO use. e.g.
+caput -a ISTTOK:central:ATCAIOP1-WO 14 0.191 0.174 -0.036 -0.044 0.183 0.126 0.020 0.140 -0.461 -0.572 0.022 -0.262 0.475 0.353
+
+"""
+import numpy as np
+
+import pyqtgraph as pg
+from pyqtgraph.Qt import QtWidgets, mkQApp
+# from mdsClient import mdsClient
+# from mdsthin.exceptions import TreeNNF
+import argparse
+
+from ClientMdsThin import ClientMdsThin as cltMds
+
+ADC_CHANNELS = 16 # channels stored in ISTTOK MDS
+ADC_BIT_LSHIFT = 2**14
+MDS_URL = "oper@atca-marte2"
+
+class MainWindow(QtWidgets.QMainWindow):
+ """ main window """
+ def __init__(self, *args, **kwargs):
+ super(MainWindow, self).__init__(*args, **kwargs)
+ parser = argparse.ArgumentParser(
+ description="""Script to plot AtcaIop MDSplus data and calc drifts
+ """)
+
+ parser.add_argument('-s', '--shot', type=int,
+ help='Mds+ pulse Number ([1, ...])', default=100)
+ parser.add_argument('-m', '--maxpoints', type=int,
+ help='Max points to plot', default=50000)
+ parser.add_argument('-a', '--averages', action='store_true',
+ help='calc Averages')
+ parser.add_argument('-d', '--decimated', action='store_true',
+ help='Use decimated data')
+ # parser.add_argument('-w', '--drift', action='store_true', help='Calc drifts')
+ parser.add_argument('-z', '--zero', action='store_true',
+ help='Zero integral Lines')
+
+ parser.add_argument('-u', '--url', default=MDS_URL,
+ help='MDSplus host url')
+
+ args = parser.parse_args()
+ print(f"args.shot {args.shot}")
+ self.mclient = cltMds(url=args.url)
+ self.mclient.getTreeData(shot=args.shot)
+ # gr_wid = pg.GraphicsLayoutWidget(show=True)
+ cw = QtWidgets.QWidget()
+ glay = QtWidgets.QGridLayout()
+ cw.setLayout(glay)
+ # layout.setSpacing(0)
+ # layout.setColumnStretch(layout.columnCount(), 1)
+ pw1 = pg.PlotWidget(name='Plot1') ## giving the plots names allows us to link their axes
+ pw1.addLegend()
+ glay.addWidget(pw1, 0, 0)
+ glay.setRowStretch(0, 1)
+ glay.setRowStretch(1, 2)
+
+ # self.setCentralWidget(gr_wid)
+ self.setCentralWidget(cw)
+ self.setWindowTitle('pyqtgraph ISTTOK')
+
+ # p1 = gr_wid.addPlot(0,0, 1,1, title="raw data")
+ time = self.mclient.timeR
+ for i in range(ADC_CHANNELS):
+ dataAdc = self.mclient.adcRawData[i]
+ pw1.plot(dataAdc, pen=pg.mkPen(i, width=1),
+ name="ch {}".format(i))
+
+ pw2 = pg.PlotWidget(name='integ data') ## giving the plots names allows us to link their axes
+ pw2.addLegend()
+ glay.addWidget(pw2, 1, 0)
+ # piw2 = gr_wid.addPlot(1,0, 1,1, title="integ data")
+
+ time = self.mclient.timeI
+ for i in range(ADC_CHANNELS):
+ data = self.mclient.adcIntegData[i]
+ pw2.plot(data, pen=pg.mkPen(i, width=1),
+ name="ch {}".format(i))
+ #, pen=(255,0,0), name="Red curve")
+
+ # sub1 = gr_wid.addLayout(0,2, 1,2)
+ # piw2 = gr_wid.addPlot(1,0, 1,1, title="integ data")
+
+ time = self.mclient.timeI
+ for i in range(6):
+ data = self.mclient.adcIntegData[i]
+ pw2.plot(data, pen=pg.mkPen(i, width=1))
+ #, pen=(255,0,0), name="Red curve")
+
+ # sub1 = gr_wid.addLayout(0,2, 1,2)
+ self.resize(800, 700)
+ self.show()
+ # SLOT: This has default parameters and can be called without a value
+ def my_custom_fn(self, a="HELLLO!", b=5):
+ print(a, b)
+
+
+mkQApp("ColorBarItem Example")
+main_window = MainWindow()
+
+## Start Qt event loop
+if __name__ == '__main__':
+ pg.exec()
+ ## Create image items
+
+"""
+ l = QtWidgets.QVBoxLayout()
+ # sub1.addLabel("Standard mouse interaction:
left-drag to pan, right-drag to zoom.")
+ l.addWidget(QtWidgets.QLabel("Standard mouse interaction:
left-drag to pan, right-drag to zoom."))
+ saveBtn = QtWidgets.QPushButton('Channel')
+ saveBtn.setCheckable(True)
+ saveBtn.clicked.connect(lambda x: self.my_custom_fn(x, 25))
+
+ l.addWidget(saveBtn)
+ # sub1.addItem(saveBtn)
+ glay.addLayout(l, 0, 2)
+
+"""