EP CalcOff no Msg

Signed-off-by: Bernardo Carvalho <bernardo.carvalho@tecnico.ulisboa.pt>

Analysis/SdasImport2File.py

@@ -80,8 +80,8 @@ def get_arguments():
                         action='store_true', help='Import Mirnov')
     parser.add_argument('-l', '--langmuir',
                         action='store_true', help='Import Langmuir')
-    parser.add_argument('-t', '--ploT',
+    parser.add_argument('-t', '--trigger', type=int,
-                        action='store_true', help='Plot Signals')
+                        help='Trigger sample', default='0')
     parser.add_argument('-n', '--names',
                         action='store_true', help='Print Node Table')
     parser.add_argument('-z', '--zeros', type=int,
@@ -101,8 +101,13 @@ if (__name__ == "__main__"):
         data, tzero_us, period = LoadSdasData(client, nd['sdas'], pulseNo)
         langmuirData.append(data)
     time = np.arange(len(data), dtype='uint32') * int(period)
+    trigger = np.zeros(len(data), dtype='uint32')
+    if args.trigger > 0:
+        trigger[args.trigger:] = 1
+
     langmuirNp = np.array(langmuirData).T
-    data2file = np.insert(langmuirNp, 0, time,  axis=1)
+    data2file = np.insert(langmuirNp, 0, trigger,  axis=1)
+    data2file = np.insert(data2file, 0, time,  axis=1)
     if args.zeros > 0:
         nCol = data2file.shape[1]
         zerRows = np.zeros([args.zeros, nCol])
@@ -112,8 +117,8 @@ if (__name__ == "__main__"):
 #    head = ('#Time (uint32)[1],Langmuir0 (float32)[1],Langmuir1 (float32)[1],'
 #            'Langmuir2 (float32)[1],Langmuir3 (float32)[1]')
 #    formt = '%d,%.6f,%.6f,%.6f,%.6f'
-    formt = '%d,{%.6f,%.6f,%.6f,%.6f}'
+    formt = '%d,%d,{%.6f,%.6f,%.6f,%.6f}'
-    head = '#TimeSdas (uint32)[1],LangmuirSignals (float32)[4]'
+    head = '#TimeSdas (uint32)[1],Trigger (uint32)[1],LangmuirSignals (float32)[4]'
     np.savetxt(filename, data2file, fmt=formt,
                header=head, comments='')
     # , delimiter=',')

Analysis/pyqtPlotFile.py

@@ -0,0 +1,113 @@
+#!/usr/bin/env python3
+"""
+This script plots the MARTe2 ATCAIop samples stored in MDSplus
+All of the plots may be panned/scaled by dragging with
+the left/right mouse buttons. Right click on any plot to show a context menu.
+
+To change EPICS EO, WO use. e.g.
+caput -a ISTTOK:central:ATCAIOP1-WO 14 0.191 0.174 -0.036 -0.044 0.183 0.126 0.020 0.140 -0.461 -0.572 0.022 -0.262 0.475 0.353
+
+"""
+import numpy as np
+
+import pyqtgraph as pg
+# from pyqtgraph.Qt import QtCore
+import argparse
+
+app = pg.mkQApp("Plotting MARTe2 AtcaIop Data")
+# mw = QtWidgets.QMainWindow()
+# mw.resize(800,800)
+
+# MAX_SAMPLES = 50000
+ADC_CHANNELS = 14  # channels stored in ISTTOK
+ADC_DECIM_RATE = 200
+
+parser = argparse.ArgumentParser(description=
+        """Script to plot AtcaIop MDSplus data and calc drifts
+        To change EPICS EO, WO use. e.g.
+        caput -a ISTTOK:central:ATCAIOP1-WO 14 0.191 0.174 -0.036 -0.044 0.183 0.126 0.020 0.140 -0.461 -0.572 0.022 -0.262 0.475 0.353""")
+
+# parser.add_argument('-l','--list', nargs='+',
+# help='<Required> Set flag', required=True)
+# parser.add_argument('-l','--list', nargs='+')
+parser.add_argument('-c', '--crange', nargs='+', type=int,
+                    help='Channel plots (1 12)', default=[1, 12])
+parser.add_argument('-i', '--irange', nargs='+', type=int, default=[1, 12])
+# arser.add_argument('pulse','-', nargs='+', help='<Required> Set flag', required=True)
+parser.add_argument('-s', '--shot', type=int,
+                    help='Mds+ pulse Number ([1, ...])', default=100)
+parser.add_argument('-m', '--maxpoints', type=int,
+                    help='Max points to plot', default=1000)
+parser.add_argument('-e', '--averages', action='store_true',
+                    help='Calc averages')
+parser.add_argument('-d', '--decimated', action='store_true',
+                    help='Use decimated data')
+# parser.add_argument('-w', '--drift', action='store_true', help='Calc drifts')
+parser.add_argument('-z', '--zero', action='store_true',
+                    help='Zero integral Lines')
+parser.add_argument('-f', '--file', type=str,
+                        help='filename device to open', default='LangmuirSdas')
+
+args = parser.parse_args()
+
+
+win = pg.GraphicsLayoutWidget(show=True, title="Basic plotting examples")
+win.resize(1000, 600)
+win.setWindowTitle('ISTTOK Plotting')
+
+# Enable antialiasing for prettier plots
+pg.setConfigOptions(antialias=True)
+
+p1 = win.addPlot(title="SDAS Languir Probe data")
+# add plt.addLegend() BEFORE you create the curves.
+# mdsNode = tree.getNode("ATCAIOP1.ADC0RAW")
+# dataAdc = mdsNode.getData().data()
+# timeData = mdsNode.getDimensionAt(0).data()
+p1.addLegend()
+start = args.crange[0] - 1
+stop = args.crange[1]
+
+dataSdas = np.load(args.file)
+x = dataSdas[:args.maxpoints, 0] / 1e3  # us -> ms
+
+# for i in range(1, 2):
+
+lineName = ['Time', 'Trigger',
+            'ElectricTop', 'ElectricInner', 'ElectricOuter', 'ElectricBottom']
+for i in [2, 3, 4, 5]:
+    y = dataSdas[:args.maxpoints, i]
+    # p1.plot(y, pen=pg.mkPen(i, width=2), name=f"Ch {i}")
+    p1.plot(y, pen=pg.mkPen(i, width=2), name=lineName[i])
+
+p1.showGrid(x=True, y=True, alpha=0.5)
+# p1.setLabel('bottom', "Time", units='ms')
+# p1.setLabel('bottom', "Samp", units='')
+
+win.nextRow()
+
+p2 = win.addPlot(title="MARTE2 output data")
+dataOut = np.genfromtxt('../Startup/IsttokOutput.csv', delimiter=',')
+p2.addLegend()
+x = dataOut[:args.maxpoints, 0] / 1e3  # us -> ms
+y = dataOut[:args.maxpoints, 1]
+# for i in range(1, 5):
+lineName = ['Time', 'OutMdsW0', 'OutMdsW1', 'OutMdsW2', 'OutMdsW3']
+for i in [1, 2, 3, 4,]:
+    y = dataOut[:args.maxpoints, i]
+    p2.plot(y, pen=pg.mkPen(i, width=2), name=lineName[i])
+
+p2.showGrid(x=True, y=True, alpha=0.5)
+# p2.plot(x, y)  # , pen=pg.mkPen(i, width=2))  # , name=f"Ch {i+1}")
+
+p2.setLabel('bottom', "Time", units='ms')
+# print("WO: ", end='')
+# updatePlot()
+
+if __name__ == '__main__':
+    # import sys
+    # if sys.flags.interactive != 1 or not hasattr(QtCore, 'PYQT_VERSION'):
+    #    pg.QtGui.QApplication.exec_()
+
+    # iprint("xwc")
+    pg.exec()
+# vim: syntax=python ts=4 sw=4 sts=4 sr et

Configurations/RTApp-Isttok-File.cfg

@@ -168,12 +168,14 @@
                     param1 = Online
                 }
             }
+            /*
             +CalcOffSetsMsg = {
                 Class = "Message"
                     Destination = "MdsLoopApp.Functions.GAMElectricProbes"
                     Function = "CalcOffSets"
                     Mode = "ExpectsReply"
             }
+            */
             +StopCurrentStateExecutionMsg = {
                 Class = Message
                 Destination = MdsLoopApp
@@ -243,20 +245,6 @@
         }   
     }
 }
-+Types = {
-    Class = ReferenceContainer
-    +LangmuirStructure = {
-        Class = IntrospectionStructure
-        TimeSdas = {
-            Type = uint32
-            NumberOfElements = 1
-        } 
-        SignalArray = {
-            Type = float32
-            NumberOfElements = 4
-        } 
-    }
-}
 $MdsLoopApp = {
     Class = RealTimeApplication
     +Functions = {
@@ -306,50 +294,39 @@ $MdsLoopApp = {
         +GAMFileReader = {
             Class = IOGAM
             InputSignals = {
-                Inputs = {
+                TimeSdas = {
                     DataSource = FileReader_DS
-                    Type = LangmuirStructure 
-                    MemberAliases = {
-                        Inputs.TimeSdas = TimeSdas
-                        Inputs.SignalArray = LangmuirSignals
-                    }
-                }
-            } 
-            OutputSignals = {
-                LangmuirStrt = {
-                    DataSource = DDB1
-                    Type = LangmuirStructure
-                    MemberAliases = {
-                        TimeSdasA = "LangmuirStrt.TimeSdas"
-                        LangmuirSignalsA = "LangmuirStrt.SignalArray" 
-                    }
-                }
-            }
-        }
-        +FlatIOGAM = {
-            Class = FlattenedStructIOGAM
-                InputSignals = {
-                    LangmuirStrt = { //Exactly one structure signal shall be defined.
-                        Type = LangmuirStructure //The Type shall be structured and is required.
-                        DataSource = DDB1 //Compulsory.
-                    } 
-                }
-            OutputSignals = {
-                LangmuirStrt_TimeSdas = {
                     Type = uint32
-                    NumberOfElements = 1
                 } 
-                LangmuirStrt_SignalArray = {
+                Trigger = {
+                    DataSource = FileReader_DS
+                    Type = uint32
+                } 
+                LangmuirSignals = {
+                    DataSource = FileReader_DS
+                    Type = float32
+                } 
+            } 
+            OutputSignals = {
+                TimeSdas = {
+                    DataSource = "DDB1"
+                    Type = uint32
+                } 
+                TriggerSdas = {
+                    DataSource = "DDB1"
+                    Type = uint32
+                } 
+                LangmuirSigs = {
+                    DataSource = "DDB1"
                     Type = float32
                     NumberOfElements = 4
                 } 
             }
         }
-
         +GAMLangSigs= {
             Class = IOGAM
             InputSignals = {
-                LangmuirStrt_SignalArray = {
+                LangmuirSigs = {
                     DataSource = "DDB1"
                     Type = float32
                     NumberOfElements = 4
@@ -374,58 +351,17 @@ $MdsLoopApp = {
                 }
             }
         }
-        /*
-        +GAMFileReaderS = {
-            Class = IOGAM
-            InputSignals = {
-                TimeSdas = {
-                    DataSource = FileReaderS_DS
-                    Type = uint32
-                }
-                LangmuirSignals = {
-                    DataSource = FileReaderS_DS
-                    Type = float32
-                    NumberOfElements = 4
-                }
-            }
-            OutputSignals = {
-                TimeSdasS = {
-                    DataSource = "DDB1"
-                    Type = uint32
-                }
-                LangmuirS = {
-                    DataSource = "DDB1"
-                    Type = float32
-                    NumberOfElements = 4
-                }
-            }
-        }
-                OutMdsW1 = {
-                    DataSource = FileSignalsWriter
-                    Type = float32
-                }
-                OutMdsW2 = {
-                    DataSource = FileSignalsWriter
-                    Type = float32
-                }
-                OutMdsW3 = {
-                    DataSource = FileSignalsWriter
-                    Type = float32
-                }
-                //"LangmuirStrt.SignalsL[0]" = {
-                LangmuirStrt_SignalArray = {
-                    DataSource = "DDB1"
-                    Type = float32
-                    NumberOfElements = 4
-                }
-        */
         +GAMElectricProbes = {
             Class = ElectricProbesGAM
             Gain = 5 //Compulsory
             NumberOfSamplesAvg = 5 //Compulsory
             ResetInEachState = 0 //Compulsory. 1–> reset in each state, 0–> reset if the previous state is different from the next state
             InputSignals = {
-                LangmuirStrt_SignalArray = {
+                TriggerSdas = {
+                    DataSource = "DDB1"
+                    Type = uint32
+                }
+                LangmuirSigs = {
                     DataSource = "DDB1"
                     Type = float32
                     NumberOfElements = 4
@@ -576,7 +512,7 @@ $MdsLoopApp = {
                 +Thread1 = {
                     Class = RealTimeThread
                     CPUs = 0x1
-                    Functions = {GAMTimer GAMFileReader FlatIOGAM GAMLangSigs GAMElectricProbes GAMFileWriter }
+                    Functions = {GAMTimer GAMFileReader GAMLangSigs GAMElectricProbes GAMFileWriter }
                 }
             }
         }

GAMs/ElectricProbesGAM/ElectricProbesGAM.cpp

@@ -64,12 +64,15 @@ namespace MARTe {
         inputElectricOuter  = NULL_PTR(MARTe::float32 *);
         inputElectricBottom = NULL_PTR(MARTe::float32 *);
 */
-        lastInputs = NULL_PTR(MARTe::float32**);
+        triggerSdas = NULL_PTR(MARTe::uint32 *);
         inputSignal = NULL; // NULL_PTR(MARTe::float32*);
 
         outputEpR = NULL_PTR(MARTe::float32 *);
         outputEpZ = NULL_PTR(MARTe::float32 *);
         resetInEachState = false;
+
+        lastInputs = NULL_PTR(MARTe::float32**);
+        lastTriggerSdas = 0u;
     }
 
     ElectricProbesGAM::~ElectricProbesGAM() {
@@ -90,13 +93,6 @@ namespace MARTe {
             }
             delete[] lastInputs;
         }
-/*
-        for (k=0u; k < EP_NUM_INPUTS; k++) {
-            if(lastInputs[k] != NULL_PTR(MARTe::float32 *)) {
-                delete [] lastInputs[k];
-            }
-        } 
-*/
     }
 
     bool ElectricProbesGAM::Initialise(MARTe::StructuredDataI & data) {
@@ -151,20 +147,20 @@ namespace MARTe {
     bool ElectricProbesGAM::Setup() {
         using namespace MARTe;
         uint32 numberOfInputSignals = GetNumberOfInputSignals();
-        bool ok = (numberOfInputSignals == 1u);
+        bool ok = (numberOfInputSignals == 2u);
         if (!ok) {
-            REPORT_ERROR(ErrorManagement::ParametersError, "The number of input signals shall be equal to 4. numberOfInputSignals = %d ", numberOfInputSignals);
+            REPORT_ERROR(ErrorManagement::ParametersError, "The number of input signals shall be equal to 2. numberOfInputSignals = %d ", numberOfInputSignals);
         }
         if (ok) {
 
             StreamString inputSignalName;
             ok = GetSignalName(InputSignals, 0u, inputSignalName);
             TypeDescriptor inputSignalType = GetSignalType(InputSignals, 0u);
-            ok = (inputSignalType == Float32Bit);
+            ok = (inputSignalType == UnsignedInteger32Bit);
             if (!ok) {
                 const char8 * const inputSignalTypeStr = TypeDescriptor::GetTypeNameFromTypeDescriptor(inputSignalType);
                 REPORT_ERROR(ErrorManagement::ParametersError,
-                        "The type of the input signals shall be float32. inputSignalType = %s", inputSignalTypeStr);
+                        "The type of the input signals shall be uint32. inputSignalType = %s", inputSignalTypeStr);
             }
             uint32 numberOfInputSamples = 0u;
             if (ok) {
@@ -194,6 +190,49 @@ namespace MARTe {
             if (ok) {
                 ok = GetSignalNumberOfElements(InputSignals, 0u, numberOfInputElements);
             }
+            if (ok) {
+                ok = (numberOfInputElements == 1u);
+            }
+            if (!ok) {
+                REPORT_ERROR(ErrorManagement::ParametersError,
+                        "The number of input signal elements shall be equal to 1. numberOfInputElements(%s) = %d", inputSignalName.Buffer(), numberOfInputElements);
+            }
+            ok = GetSignalName(InputSignals, 1u, inputSignalName);
+            inputSignalType = GetSignalType(InputSignals, 1u);
+            ok = (inputSignalType == Float32Bit);
+            if (!ok) {
+                const char8 * const inputSignalTypeStr = TypeDescriptor::GetTypeNameFromTypeDescriptor(inputSignalType);
+                REPORT_ERROR(ErrorManagement::ParametersError,
+                        "The type of the input signals shall be float32. inputSignalType = %s", inputSignalTypeStr);
+            }
+            numberOfInputSamples = 0u;
+            if (ok) {
+                ok = GetSignalNumberOfSamples(InputSignals, 1u, numberOfInputSamples);
+            }
+
+            if (ok) {
+                ok = (numberOfInputSamples == 1u);
+            }
+            if (!ok) {
+                REPORT_ERROR(ErrorManagement::ParametersError,
+                        "The number of input signals samples shall be equal to 1. numberOfInputSamples = %d", numberOfInputSamples);
+            }
+            numberOfInputDimensions = 0u;
+            if (ok) {
+                ok = GetSignalNumberOfDimensions(InputSignals, 1u, numberOfInputDimensions);
+            }
+
+            if (ok) {
+                ok = (numberOfInputDimensions == 0u);
+                if (!ok) {
+                    REPORT_ERROR(
+                            ErrorManagement::ParametersError,
+                            "The number of input signals dimensions shall be equal to 0. numberOfInputDimensions(%s) = %d", inputSignalName.Buffer(), numberOfInputDimensions);
+                }
+            }
+            if (ok) {
+                ok = GetSignalNumberOfElements(InputSignals, 1u, numberOfInputElements);
+            }
             if (ok) {
                 ok = (numberOfInputElements == 4u);
             }
@@ -220,7 +259,8 @@ namespace MARTe {
             }
         }
         if (ok) {
-            inputSignal   = reinterpret_cast<float32 *>(GetInputSignalMemory(0u));
+            triggerSdas = reinterpret_cast<uint32 *>(GetInputSignalMemory(0u));
+            inputSignal   = reinterpret_cast<float32 *>(GetInputSignalMemory(1u));
 /*
             inputElectricTop    = reinterpret_cast<float32 *>(GetInputSignalMemory(0u));
             inputElectricInner  = reinterpret_cast<float32 *>(GetInputSignalMemory(1u));
@@ -309,18 +349,16 @@ namespace MARTe {
     }
 
     bool ElectricProbesGAM::Execute() {
-        //*outputEpZ = 3.4;
+        /* inputElectricOuter - inputElectricInner */
-        *outputEpR =  inputSignal[0];
+        *outputEpR =  (inputSignal[2] - inputOffset[2]) - 
-        *outputEpZ =  inputSignal[0] - inputOffsets[0];
+            (inputSignal[1] - inputOffset[1]);
-        //*outputEpR =  (inputSignal[2] - inputOffsets[2]) - 
+        *outputEpZ =  inputSignal[0] - inputOffset[0];
         //*outputEpZ =  inputSignal[0] - inputSignal[3];
-        //*outputSignal1 = *inputSignals[0] - *inputSignals[1];
 
-        //update the last values
+        /* update the last value arrays */
         for (MARTe::uint32 i = 0u; i < numberOfInputElements; i++) {
 
             if (numberOfSamplesAvg > 2u) {
-                /*lint -e{9117} implicit conversion is safe*/
                 for (MARTe::uint32 k = (numberOfSamplesAvg - 1u); k > 0u; k--) {
                     lastInputs[i][k] = lastInputs[i][k - 1];
                 }
@@ -335,9 +373,18 @@ namespace MARTe {
             lastInputs[1][0] = *inputElectricInner;
             lastInputs[2][0] = *inputElectricOuter;
             lastInputs[3][0] = *inputElectricBottom;
-                                                  //lastInputs[i][0] = input[i][numberOfSamples - 1u];
+                                         
+        lastInputs[i][0] = input[i][numberOfSamples - 1u];
         }
 */
+
+        /* Should use a MARTe2 Message. 
+         * Here for Sdas recorded signel with Trigger pseudo-signal
+         * */
+        if ((lastTriggerSdas == 0u) && (*triggerSdas == 1u)) {
+            CalcOffSets();
+        }
+        lastTriggerSdas = *triggerSdas;
         return true;
     }
 
@@ -404,8 +451,6 @@ namespace MARTe {
     ErrorManagement::ErrorType ElectricProbesGAM::CalcOffSets() {
 
         ErrorManagement::ErrorType ret = MARTe::ErrorManagement::NoError;
-//REPORT_ERROR(ErrorManagement::Information, 
-  //                      "CalcOffSets. numberOfSamplesAvg: %d!", numberOfSamplesAvg);
         REPORT_ERROR(ErrorManagement::Information, 
                         "CalcOffSets. Inputs:%f, %f, %f, %f.",
                         inputSignal[0],
@@ -414,27 +459,26 @@ namespace MARTe {
                         inputSignal[3]);
         if (numberOfSamplesAvg > 1u) {
             for (uint32 i = 0u; i < EP_NUM_INPUTS; i++) {
-                inputOffsets[i] = 0.0f;
+                inputOffset[i] = 0.0f;
                 for (uint32 k =  0 ; k < numberOfSamplesAvg; k++) {
-                    inputOffsets[i] += lastInputs[i][k];
+                    inputOffset[i] += lastInputs[i][k];
                 }
-                inputOffsets[i] /= numberOfSamplesAvg;
+                inputOffset[i] /= numberOfSamplesAvg;
             }
             REPORT_ERROR(ErrorManagement::Information, 
                         "CalcOffSets. Offset:%f, %f, %f, %f.",
-                        inputOffsets[0],
+                        inputOffset[0],
-                        inputOffsets[1],
+                        inputOffset[1],
-                        inputOffsets[2],
+                        inputOffset[2],
-                        inputOffsets[3]);
+                        inputOffset[3]);
         }
 
         return ret;
     }
 
 
-    CLASS_REGISTER(ElectricProbesGAM, "1.0")
+    CLASS_REGISTER(ElectricProbesGAM, "1.1")
 
-//    CLASS_METHOD_REGISTER(ElectricProbesGAM, ElectricProbesGAM::CalcOffSets)
     CLASS_METHOD_REGISTER(ElectricProbesGAM, CalcOffSets)
 
 } /* namespace MARTeIsttok */

GAMs/ElectricProbesGAM/ElectricProbesGAM.h

@@ -153,8 +153,9 @@ namespace MARTe {
              * The input signals
              */
 
+            uint32 *triggerSdas;
             /**
-             * The input signal
+             * The input Electric Probes signals
             */
             float32 *inputSignal;
 
@@ -166,7 +167,7 @@ namespace MARTe {
             */
             uint32 numberOfInputElements;
 
-            float32 inputOffsets[4];
+            float32 inputOffset[4];
 
             MARTe::float32 **lastInputs;
 
@@ -174,7 +175,6 @@ namespace MARTe {
              * The output signals
              */
             // MARTe::float32 **outputSignals;
-            //MARTe::float32 *outputSignal1;
             float32 *outputEpR;
             float32 *outputEpZ;
 
@@ -188,6 +188,10 @@ namespace MARTe {
              */
             StreamString lastStateExecuted;
 
+            /**
+             * Flag to detect SDAS Trigger Edge.
+             */
+            uint32 lastTriggerSdas;
 
     };
 }

Startup/RtAppFile.sh

@@ -0,0 +1,91 @@
+#!/bin/bash
+#Arguments -f FILENAME -m MESSAGE | -s STATE [-d cgdb|strace]
+
+MDS=0
+DEBUG=""
+INPUT_ARGS=$*
+while test $# -gt 0
+do
+    case "$1" in
+        -d|--debug)
+        DEBUG="$2"
+        ;;
+        -mds)
+        MDS=1
+        ;;
+    esac
+    shift
+done
+
+MARTe2_HOME=~/git-repos/MARTe2
+
+MARTe2_DIR=$MARTe2_HOME/MARTe2
+MARTe2_Components_DIR=$MARTe2_HOME/MARTe2-components
+MARTe2_Demos_DIR=~/git-repos/MARTe2-demos-padova
+
+EPICS_ROOT=/opt/epics
+EPICS_BASE=${EPICS_ROOT}/epics-base
+EPICS_HOST_ARCH=linux-x86_64
+EPICS_CA_ADDR_LIST="localhost"
+#export EPICS_CA_ADDR_LIST="192.168.0.60 192.168.0.21 192.168.0.22 192.168.0.99"
+#export EPICS_CA_ADDR_LIST="192.168.88.251"
+# export EPICS_CA_ADDR_LIST="10.10.136.177"
+export EPICS_CA_AUTO_ADDR_LIST="NO"
+# export rtappdemo_path=$MARTe2_Demos_DIR/Trees
+# rtappreader_path=$MARTe2_Demos_DIR/Trees
+
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:../Build/x86-linux/Components/GAMs/ElectricProbesGAM/
+
+# LD_LIBRARY_PATH=$LD_LIBRARY_PATH:../Build/x86-linux/Components/DataSources/ADCSimulator/
+#LD_LIBRARY_PATH=$LD_LIBRARY_PATH:../Build/x86-linux/Components/Other/ControllerEx1/
+#LD_LIBRARY_PATH=$LD_LIBRARY_PATH:../Build/x86-linux/Components/Other/ControllerEx2/
+
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_DIR/Build/x86-linux/Core/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/EPICSCA/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/EPICSPVA/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/LinuxTimer/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/LoggerDataSource/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/FileDataSource/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/LinkDataSource/
+#LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/UDP/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/MDSReader/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/MDSWriter/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/RealTimeThreadSynchronisation/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/DataSources/RealTimeThreadAsyncBridge/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/ConstantGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/ConversionGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/FlattenedStructIOGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/IOGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/MessageGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/FilterGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/HistogramGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/SSMGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/TriggerOnChangeGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/GAMs/WaveformGAM/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/Interfaces/BaseLib2Wrapper/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/Interfaces/EPICS/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/Interfaces/EPICSPVA/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/Interfaces/MemoryGate/
+# LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/Interfaces/NI9157Device/
+# LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/Interfaces/OPCUA/
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MARTe2_Components_DIR/Build/x86-linux/Components/Interfaces/SysLogger/
+
+LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$EPICS_BASE/lib/$EPICS_HOST_ARCH
+
+echo $LD_LIBRARY_PATH
+export LD_LIBRARY_PATH=$LD_LIBRARY_PATH
+
+#export isttoksdas_path=/home/mdsplus/Trees
+export isttokoutput_path=/home/mdsplus/Trees
+
+# export rtappdemo_path=../Trees
+#if [ ${MDS} == 1 ]; then
+#fi
+
+if [ "$DEBUG" = "cgdb" ]
+then
+    cgdb --args $MARTe2_DIR/Build/x86-linux/App/MARTeApp.ex $INPUT_ARGS
+else
+    $MARTe2_DIR/Build/x86-linux/App/MARTeApp.ex $INPUT_ARGS
+fi
+